Exploring 38 Lockdown Learning Bioinformatics Along Deseq2 Recap I

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  • Walk through a practical introduction to
  • A basic task in the analysis of count data from RNA-seq is the detection of differentially expressed genes.
  • A walk-through of steps to perform differential gene expression analysis in a dataset with human airway smooth muscle cell lines ...
  • In lesson #30 we meet
  • Countdown: 0:00 Introduction: 4:51 The hypergeometric test: 17:28 clusterProfiler: 28:30 enrichGO:

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Countdown: 0:00 Introduction: 4:59 Writing to a file: 12:00 Reading into Excel: 15:07 Starting A549 Analysis: 28:40 Restarting ... Countdown: 0:00 Introduction: 2:22 PCA: 5:54 Results: 24:23 Filtering: 32:00 Plotting: Countdown: 0:00 Introduction: 4:31 Heatmaps: 11: Countdown: 0:00 Introduction: 2:36 DataFrame vs data.frame: 8:06

Countdown: 0:00 Introduction: 4:50 Normalisation

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